PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004495746.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 326aa    MW: 37231 Da    PI: 6.9513
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004495746.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.4e-13133184155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +r++h ++Er+RR+++N+ ++ Lr+l+P +   + ++ + a+i   A++++k+L+
  XP_004495746.1 133 QRMTHIAVERNRRKQMNQYLSVLRSLMPDS---YIQRGDQASIIGGAINFVKELE 184
                     79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.7E-13131188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.40E-13131188No hitNo description
SuperFamilySSF474599.29E-16132197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.167132183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.8E-10133184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.7E-9138189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MCLPEGERDR ERTMALETVV YPQTQDPFSY GIKDCYNFNF LSTNFVYEDF NFVTKEQQKH  60
GSFIFLDNQT ENNNTTTTTS SSMLQPTPTT PHLNELQETT DPSSKNPNFD TVVFRPKRRR  120
ARSRKNKEEI ENQRMTHIAV ERNRRKQMNQ YLSVLRSLMP DSYIQRGDQA SIIGGAINFV  180
KELEQKLHFL GSKKEEVKSD DVGEGSNKSF SEFFSFPQYS TSGGNSASVI GEKVGEIADI  240
EVTMVESHAN LKIRSKKRPK QLLKMVSGLH NMHLTILHLN VTTTCEIVLY SLSVKVEDDC  300
KLGSVDDIAA AVYQMLNRIQ QETMLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133144RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ0110130.0AJ011013.1 Cicer arietinum epicotyl EST, clone Can133.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004495746.10.0PREDICTED: transcription factor bHLH94
SwissprotQ9C7T44e-83BH096_ARATH; Transcription factor bHLH96
TrEMBLV7BIG21e-162V7BIG2_PHAVU; Uncharacterized protein
STRINGGLYMA10G29760.11e-151(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.16e-80bHLH family protein